Heinz Himmelbauer

Univ.Prof. Mag. Dr.rer.nat. Heinz Himmelbauer
Institut für Computergestützte Biologie
Standort Muthgasse 18, 1190 Wien
Email heinz.himmelbauer@boku.ac.at
Tel: +43 1 47654-79155

ORCID: 0000-0001-8897-2928
35242348600: AuthorId

Meine Lehrveranstaltungen

Bioinformatik (106005) Genomik

Laufbahn

2019 Institutsleiter, Institut für Computergestützte Biologie (ICB), Department für Biotechnologie (DBT), BOKU Wien
2015 Professur für Bioinformatik, Department für Biotechnologie (DBT), BOKU Wien
2008 - 2015 Unit Head, Centre for Genomic Regulation (CRG), Barcelona, Spanien, 2008-2012 Ultrasequencing Unit, 2012-2015 Genomics Unit
1995 - 2015 Arbeitsgruppenleiter, Max-Planck-Institut für molekulare Genetik, Berlin-Dahlem, Deutschland, ab 2008 Gastgruppe
1993 - 1995 Postdoc, Institut für Molekulare Pathologie (IMP), Wien, Österreich
1991 - 1993 Postdoc, Princeton University, Princeton, NJ, USA
1987 - 1991 Diplomand, Doktorand, Imperial Cancer Research Fund (ICRF), London, GB
1983 - 1991 Studium Universität Salzburg, Österreich, 1988 Diplom, 1991 Doktorat

Projekte

Es wurden 0 Projekte gefunden.

Publikationen

Wissentransfer in die Gesellschaft

Medienbeiträge

Vorträge

Jahr: 2024 - Insights into RNAse-based self- incompatibility system in Beta vulgaris

Autoren: Yardeni, G; Holzweber, T; Dohm, JC; Himmelbauer, H

Veranstaltung: XX International Botanical Congress
Jahr: 2024 - Machine learning approaches for the analysis of genomic variants in plants

Autoren: Sandell, F; Nguyen-Hoang, A; Himmelbauer, H; Dohm, J

Veranstaltung: German Conference on Bioinformatics 2024
Jahr: 2024 - Genomic analysis of wild and cultivated beets

Autoren: Sandell, F; Himmelbauer, H; Dohm, J

Veranstaltung: 79th IIRB Congress 2024 'Innovation: our driver for a profitable and ecologically balanced sugar beet production'
Jahr: 2024 - Methylation analysis based on a plant-specific deep learning model

Autoren: Holzweber, T; Dorn, K; Himmelbauer, H; Dohm, JC

Veranstaltung: German Conference on Bioinformatics 2024
Jahr: 2024 - Genomic insights into climatic adaptation of peach (Prunus persica)

Autoren: Adhikari,K; Grossfurthner, L P; Sandell, F L; Dohm, J C; Himmelbauer, H

Veranstaltung: CPSC conference: Translational agriculture - from model plants to crops
Jahr: 2024 - Towards characterization of the genetic self-incompatibility system in Beta vulgaris

Autoren: Yardeni, G; Holzweber, T; Dohm, J C; Himmelbauer, H

Veranstaltung: 10th International Botanical Congress
Jahr: 2024 - Towards characterization of the genetic self-incompatibility system in Beta vulgaris

Autoren: Yardeni, G

Veranstaltung: EvolVienna meeting January 2024
Jahr: 2024 - Exploiting k-mers for genotype-phenotype association in spinach

Autoren: Schönmann, L

Veranstaltung: German Conference on Bioinformatics 2024
Jahr: 2023 - Back to the roots: Phylogeny of wild and cultivated beets

Autoren: Wascher, FL; Himmelbauer, H; Dohm, JC

Veranstaltung: 31st Conference on Intelligent Systems for Molecular Biology / 22nd European Conference on Computational Biology
Jahr: 2022 - K-mer based phylogeny of wild and cultivated beets

Autoren: Wascher, FL; Nancy Stralis-Pavese, N; Himmelbauer, H; Dohm, JC

Veranstaltung: 200 years Gregor Mendel: of peas, cows and people 2022
Jahr: 2022 - Long-read assemblies of sugar beet and sea beet

Autoren: Holzweber T; Dohm, JC; Gruber KR; Himmelbauer H

Veranstaltung: 2nd Beet Resources Conference 2022
Jahr: 2022 - Haplotype divergence of flowering time regulator genes in sugar beet and wild beets

Autoren: Schönmann, L; Himmelbauer, H; Dohm, JC

Veranstaltung: 2nd Beet Resources Conference 2022
Jahr: 2022 - What we can learn from Beta re-sequencing data

Autoren: Wascher, FL; Himmelbauer, H; Dohm, JC

Veranstaltung: 2nd Beet Resources Conference 2022
Jahr: 2022 - Evolutionary dynamics of the repeat landscape in sugar beet and its wild relatives

Autoren: Blazek, L; Dohm, JC; Himmelbauer, H

Veranstaltung: 200 years Gregor Mendel: of peas, cows and people 2022
Jahr: 2022 - Genetic diversity in Amaranthaceae crops

Autoren: Wascher, FL; Himmelbauer, H; Dohm, JC

Veranstaltung: 21st European Conference on Computational Biology ECCB 2022
Jahr: 2021 - Analysis of sugar beet and wild beet genomes to study relationships, origins, population dynamics and selection

Autoren: Felkel, S; Stralis-Pavese, N; Schulz, B; Dohm, JC; Himmelbauer, H

Veranstaltung: German Conference on Bioinformatics 2021
Jahr: 2021 - Comparison of wild and cultivated beets regarding repeats and transposon insertion polymorphisms

Autoren: Blazek, L; Dohm, JC; Himmelbauer, H

Veranstaltung: German Conference on Bioinformatics 2021
Jahr: 2021 - K-mer-based phylogeny of wild and cultivated beets

Autoren: Wascher, F; Stralis-Pavese, N; Schulz, B; Himmelbauer, H; Dohm, JC

Veranstaltung: German Conference on Bioinformatics 2021
Jahr: 2020 - Quinoa sequencing and detection of haplotype blocks for genome scaffolding

Autoren: Himmelbauer, H; Bodrug, A; Wascher, FL; Stralis-Pavese, N; Bürstmayr, H; Dohm, JC

Veranstaltung: "Digital Breeding". Internationales Symposium der Gesellschaft für Pflanzenzüchtung e.V. (GPZ)
Jahr: 2020 - Evolutionary dynamics of the repeat landscape in sugar beet and its wild relatives

Autoren: Blazek, B; Dohm, JC; Himmelbauer, H

Veranstaltung: "Digital Breeding". Internationales Symposium der Gesellschaft für Pflanzenzüchtung e.V. (GPZ)
Jahr: 2020 - Population analysis of sugar beet and wild beets

Autoren: Wascher, FL; Felkel, S; Stralis-Pavese, N; Schulz, B; Dohm, JC; Himmelbauer, H

Veranstaltung: "Digital Breeding". Internationales Symposium der Gesellschaft für Pflanzenzüchtung e.V. (GPZ)
Jahr: 2020 - Analysis of subgenome structure and evolution in allopolyploid plants

Autoren: Schiavinato, M; Bodrug, A; Marcet-Houben, M; Gabaldón, T; Dohm, JC; Himmelbauer, H

Veranstaltung: "Digital Breeding". Internationales Symposium der Gesellschaft für Pflanzenzüchtung e.V. (GPZ)
Jahr: 2019 - Plant Speed Dating

Autoren: Schiavinato, M; Marcet-Houben, M; Dohm, JC; Gabaldón, T; Himmelbauer, H

Veranstaltung: 12th European Conference on Python in Science
Jahr: 2018 - Detection of haplotype blocks for genome scaffolding in plants

Autoren: Bodrug, A; Bürstmayr, H; Stralis Pavese, N; Dohm, JC; Himmelbauer, H

Veranstaltung: German Conference on Bioinformatics 2018
Jahr: 2018 - Population structure and allele frequency clines in wild and cultivated beets (Beta vulgaris)

Autoren: McCann, J; Wascher, F; Stralis Pavese, N; Schulz, B; Dohm, JC; Himmelbauer, H

Veranstaltung: German Conference on Bioinformatics 2018
Jahr: 2018 - Benchmarking the impact of long-read correction methods

Autoren: Peters, P; Stralis Pavese, N; Himmelbauer, H; Dohm, JC

Veranstaltung: German Conference on Bioinformatics 2018
Jahr: 2018 - Comparative genomics of the pathogenic bacterium Tannerella forsythia

Autoren: Zwickl, NF; Stralis Pavese, N; Schäffer, C; Himmelbauer, H; Dohm, JC

Veranstaltung: German Conference on Bioinformatics 2018
Jahr: 2018 - A strategy for subgenome separation in Nicotiana benthamiana

Autoren: Schiavinato, M; Dohm, JC; Gabaldón, T; Himmelbauer, H

Veranstaltung: XIV Symposium on Bioinformatics (JBI 2018)
Jahr: 2017 - Gene prediction and gene set analysis of Nicotiana benthamiana

Autoren: Schiavinato, M; Strasser, R; Dohm, JC; Himmelbauer, H

Veranstaltung: Austrian Proteomics and Metabolomics Research Symposium APRS 2017
Jahr: 2017 - Genome analysis of wild and cultivated beets

Autoren: Dohm, JC; Bodrug, A; Rodríguez del Río, A; McGrath, MJ; Schulz, B; Himmelbauer, H

Veranstaltung: NGS' 17: Structural variation and population genomics
Jahr: 2017 - Assembly of tetraploid quinoa and separation into ancestral sub-genomes

Autoren: Bodrug, A; Minoche, AE; Bürstmayr, H; Gomez-Pando, L; Schmidt, T; Reinhardt, R; Dohm, JC; Himmelbauer, H

Veranstaltung: ALPHY 2017: Bioinformatics and Evolutionary Genomics
Jahr: 2016 - Pflanzenforschung und Pflanzenzüchtung im Zeitalter der Genomsequenzierung

Autoren: Dohm, JC; Himmelbauer, H

Veranstaltung: 150 Jahre Mendelsche Regeln: Vom Erbsenzählen zum Geneditieren 2016
Jahr: 2016 - Sugar Beet BeetMap-3, and Steps to Improve the Genome Assembly and Genome Sequence Annotation (W875)

Autoren: Weisshaar, B; Himmelbauer, H; Schmidt, T; Holtgräwe, D; Minoche, AE; Dohm, JC; Stracke, R; Zakrzewski, F; Parol-Kryger, R; Stadermann, KB; Schneider, J; Rosleff Sörensen, T; Kraft, T; Schulz, B

Veranstaltung: 24th Plant & Animal Genome Conference 2016
Jahr: 2016 - Analyzing the genomes of wild and cultivated beets

Autoren: Dohm, JC; Bodrug, A; McGrath, JM; Schulz, B; Himmelbauer, H

Veranstaltung: 15th European Conference on Computational Biology (ECCB)
Jahr: 2015 - Genomics and transcriptomics of the genus Beta using short and long sequencing reads

Autoren: Dohm, JC; Peters, P; Minoche, AE; Postel, U; Kraft, T; Schulz, B; Schmidt, T; Weisshaar, B; Himmelbauer, H

Veranstaltung: PGEV 2015: 3rd Current Opinion Conference on Plant Genome Evolution

Heinz Himmelbauer

Laufbahn

Projekte

Publikationen

Wissentransfer in die Gesellschaft

Medienbeiträge

Vorträge

Jahr: 2024 - Insights into RNAse-based self- incompatibility system in Beta vulgaris

Jahr: 2024 - Machine learning approaches for the analysis of genomic variants in plants

Jahr: 2024 - Genomic analysis of wild and cultivated beets

Jahr: 2024 - Methylation analysis based on a plant-specific deep learning model

Jahr: 2024 - Genomic insights into climatic adaptation of peach (Prunus persica)

Jahr: 2024 - Towards characterization of the genetic self-incompatibility system in Beta vulgaris

Jahr: 2024 - Towards characterization of the genetic self-incompatibility system in Beta vulgaris

Jahr: 2024 - Exploiting k-mers for genotype-phenotype association in spinach

Jahr: 2023 - Back to the roots: Phylogeny of wild and cultivated beets

Jahr: 2022 - K-mer based phylogeny of wild and cultivated beets

Jahr: 2022 - Long-read assemblies of sugar beet and sea beet

Jahr: 2022 - Haplotype divergence of flowering time regulator genes in sugar beet and wild beets

Jahr: 2022 - What we can learn from Beta re-sequencing data

Jahr: 2022 - Evolutionary dynamics of the repeat landscape in sugar beet and its wild relatives

Jahr: 2022 - Genetic diversity in Amaranthaceae crops

Jahr: 2021 - Analysis of sugar beet and wild beet genomes to study relationships, origins, population dynamics and selection

Jahr: 2021 - Comparison of wild and cultivated beets regarding repeats and transposon insertion polymorphisms

Jahr: 2021 - K-mer-based phylogeny of wild and cultivated beets

Jahr: 2020 - Quinoa sequencing and detection of haplotype blocks for genome scaffolding

Jahr: 2020 - Evolutionary dynamics of the repeat landscape in sugar beet and its wild relatives

Jahr: 2020 - Population analysis of sugar beet and wild beets

Jahr: 2020 - Analysis of subgenome structure and evolution in allopolyploid plants

Jahr: 2019 - Plant Speed Dating

Jahr: 2018 - Detection of haplotype blocks for genome scaffolding in plants

Jahr: 2018 - Population structure and allele frequency clines in wild and cultivated beets (Beta vulgaris)

Jahr: 2018 - Benchmarking the impact of long-read correction methods

Jahr: 2018 - Comparative genomics of the pathogenic bacterium Tannerella forsythia

Jahr: 2018 - A strategy for subgenome separation in Nicotiana benthamiana

Jahr: 2017 - Gene prediction and gene set analysis of Nicotiana benthamiana

Jahr: 2017 - Genome analysis of wild and cultivated beets

Jahr: 2017 - Assembly of tetraploid quinoa and separation into ancestral sub-genomes

Jahr: 2016 - Pflanzenforschung und Pflanzenzüchtung im Zeitalter der Genomsequenzierung

Jahr: 2016 - Sugar Beet BeetMap-3, and Steps to Improve the Genome Assembly and Genome Sequence Annotation (W875)

Jahr: 2016 - Analyzing the genomes of wild and cultivated beets

Jahr: 2015 - Genomics and transcriptomics of the genus Beta using short and long sequencing reads

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