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Heinz Himmelbauer

Univ.Prof. Mag. Dr.rer.nat. Heinz Himmelbauer
Institute of Computational Biology
Location Muthgasse 18, 1190 Wien
Email heinz.himmelbauer@boku.ac.at
Tel: +43 1 47654-79155

ORCID: 0000-0001-8897-2928
35242348600: AuthorId

My Courses

classifications according to Statistics Austria Bioinformatics Genomics

Career

  • 2019 Institute Head, Institute of Computational Biology (ICB), Department of Biotechnology (DBT), BOKU Vienna
  • 2015 Full professor (Bioinformatics), Department of Biotechnology (DBT), BOKU, Vienna
  • 2008 - 2015 Unit Head, Centre for Genomic Regulation (CRG), Barcelona, Spain, 2008-2012 Ultrasequencing Unit, 2012-2015 Genomics Unit
  • 1995 - 2015 Group leader, Max Planck Institute for molecular Genetics, Berlin-Dahlem, Germany, guest group 2008-2015
  • 1993 - 1995 Postdoc, Institute of Molecular Pathology (IMP), Vienna, Austria
  • 1991 - 1993 Postdoc, Princeton University, Princeton, NJ, USA
  • 1987 - 1991 Diploma student, doctoral student, Imperial Cancer Research Fund (ICRF), London, UK
  • 1983 - 1991 University of Salzburg, Austria, 1988 diploma, 1991 doctorate

Projects

0 Projects found.

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    Publications

    Knowledge Transfer to Society

    Media

    Presentations

    • Year: 2024 -  Insights into RNAse-based self- incompatibility system in Beta vulgaris

      Autoren: Yardeni, G; Holzweber, T; Dohm, JC; Himmelbauer, H

      Event: XX International Botanical Congress

    • Year: 2024 -  Machine learning approaches for the analysis of genomic variants in plants

      Autoren: Sandell, F; Nguyen-Hoang, A; Himmelbauer, H; Dohm, J

      Event: German Conference on Bioinformatics 2024

    • Year: 2024 -  Genomic analysis of wild and cultivated beets

      Autoren: Sandell, F; Himmelbauer, H; Dohm, J

      Event: 79th IIRB Congress 2024 'Innovation: our driver for a profitable and ecologically balanced sugar beet production'

    • Year: 2024 -  Methylation analysis based on a plant-specific deep learning model

      Autoren: Holzweber, T; Dorn, K; Himmelbauer, H; Dohm, JC

      Event: German Conference on Bioinformatics 2024

    • Year: 2024 -  Genomic insights into climatic adaptation of peach (Prunus persica)

      Autoren: Adhikari,K; Grossfurthner, L P; Sandell, F L; Dohm, J C; Himmelbauer, H

      Event: CPSC conference: Translational agriculture - from model plants to crops

    • Year: 2024 -  Towards characterization of the genetic self-incompatibility system in Beta vulgaris

      Autoren: Yardeni, G; Holzweber, T; Dohm, J C; Himmelbauer, H

      Event: 10th International Botanical Congress

    • Year: 2024 -  Towards characterization of the genetic self-incompatibility system in Beta vulgaris

      Autoren: Yardeni, G

      Event: EvolVienna meeting January 2024

    • Year: 2024 -  Exploiting k-mers for genotype-phenotype association in spinach

      Autoren: Schönmann, L

      Event: German Conference on Bioinformatics 2024

    • Year: 2023 -  Back to the roots: Phylogeny of wild and cultivated beets

      Autoren: Wascher, FL; Himmelbauer, H; Dohm, JC

      Event: 31st Conference on Intelligent Systems for Molecular Biology / 22nd European Conference on Computational Biology

    • Year: 2022 -  K-mer based phylogeny of wild and cultivated beets

      Autoren: Wascher, FL; Nancy Stralis-Pavese, N; Himmelbauer, H; Dohm, JC

      Event: 200 years Gregor Mendel: of peas, cows and people 2022

    • Year: 2022 -  Long-read assemblies of sugar beet and sea beet

      Autoren: Holzweber T; Dohm, JC; Gruber KR; Himmelbauer H

      Event: 2nd Beet Resources Conference 2022

    • Year: 2022 -  Haplotype divergence of flowering time regulator genes in sugar beet and wild beets

      Autoren: Schönmann, L; Himmelbauer, H; Dohm, JC

      Event: 2nd Beet Resources Conference 2022

    • Year: 2022 -  What we can learn from Beta re-sequencing data

      Autoren: Wascher, FL; Himmelbauer, H; Dohm, JC

      Event: 2nd Beet Resources Conference 2022

    • Year: 2022 -  Evolutionary dynamics of the repeat landscape in sugar beet and its wild relatives

      Autoren: Blazek, L; Dohm, JC; Himmelbauer, H

      Event: 200 years Gregor Mendel: of peas, cows and people 2022

    • Year: 2022 -  Genetic diversity in Amaranthaceae crops

      Autoren: Wascher, FL; Himmelbauer, H; Dohm, JC

      Event: 21st European Conference on Computational Biology ECCB 2022

    • Year: 2021 -  Analysis of sugar beet and wild beet genomes to study relationships, origins, population dynamics and selection

      Autoren: Felkel, S; Stralis-Pavese, N; Schulz, B; Dohm, JC; Himmelbauer, H

      Event: German Conference on Bioinformatics 2021

    • Year: 2021 -  Comparison of wild and cultivated beets regarding repeats and transposon insertion polymorphisms

      Autoren: Blazek, L; Dohm, JC; Himmelbauer, H

      Event: German Conference on Bioinformatics 2021

    • Year: 2021 -  K-mer-based phylogeny of wild and cultivated beets

      Autoren: Wascher, F; Stralis-Pavese, N; Schulz, B; Himmelbauer, H; Dohm, JC

      Event: German Conference on Bioinformatics 2021

    • Year: 2020 -  Quinoa sequencing and detection of haplotype blocks for genome scaffolding

      Autoren: Himmelbauer, H; Bodrug, A; Wascher, FL; Stralis-Pavese, N; Bürstmayr, H; Dohm, JC

      Event: "Digital Breeding". Internationales Symposium der Gesellschaft für Pflanzenzüchtung e.V. (GPZ)

    • Year: 2020 -  Evolutionary dynamics of the repeat landscape in sugar beet and its wild relatives

      Autoren: Blazek, B; Dohm, JC; Himmelbauer, H

      Event: "Digital Breeding". Internationales Symposium der Gesellschaft für Pflanzenzüchtung e.V. (GPZ)

    • Year: 2020 -  Population analysis of sugar beet and wild beets

      Autoren: Wascher, FL; Felkel, S; Stralis-Pavese, N; Schulz, B; Dohm, JC; Himmelbauer, H

      Event: "Digital Breeding". Internationales Symposium der Gesellschaft für Pflanzenzüchtung e.V. (GPZ)

    • Year: 2020 -  Analysis of subgenome structure and evolution in allopolyploid plants

      Autoren: Schiavinato, M; Bodrug, A; Marcet-Houben, M; Gabaldón, T; Dohm, JC; Himmelbauer, H

      Event: "Digital Breeding". Internationales Symposium der Gesellschaft für Pflanzenzüchtung e.V. (GPZ)

    • Year: 2019 -  Plant Speed Dating

      Autoren: Schiavinato, M; Marcet-Houben, M; Dohm, JC; Gabaldón, T; Himmelbauer, H

      Event: 12th European Conference on Python in Science

    • Year: 2018 -  Detection of haplotype blocks for genome scaffolding in plants

      Autoren: Bodrug, A; Bürstmayr, H; Stralis Pavese, N; Dohm, JC; Himmelbauer, H

      Event: German Conference on Bioinformatics 2018

    • Year: 2018 -  Population structure and allele frequency clines in wild and cultivated beets (Beta vulgaris)

      Autoren: McCann, J; Wascher, F; Stralis Pavese, N; Schulz, B; Dohm, JC; Himmelbauer, H

      Event: German Conference on Bioinformatics 2018

    • Year: 2018 -  Benchmarking the impact of long-read correction methods

      Autoren: Peters, P; Stralis Pavese, N; Himmelbauer, H; Dohm, JC

      Event: German Conference on Bioinformatics 2018

    • Year: 2018 -  Comparative genomics of the pathogenic bacterium Tannerella forsythia

      Autoren: Zwickl, NF; Stralis Pavese, N; Schäffer, C; Himmelbauer, H; Dohm, JC

      Event: German Conference on Bioinformatics 2018

    • Year: 2018 -  A strategy for subgenome separation in Nicotiana benthamiana

      Autoren: Schiavinato, M; Dohm, JC; Gabaldón, T; Himmelbauer, H

      Event: XIV Symposium on Bioinformatics (JBI 2018)

    • Year: 2017 -  Gene prediction and gene set analysis of Nicotiana benthamiana

      Autoren: Schiavinato, M; Strasser, R; Dohm, JC; Himmelbauer, H

      Event: Austrian Proteomics and Metabolomics Research Symposium APRS 2017

    • Year: 2017 -  Genome analysis of wild and cultivated beets

      Autoren: Dohm, JC; Bodrug, A; Rodríguez del Río, A; McGrath, MJ; Schulz, B; Himmelbauer, H

      Event: NGS' 17: Structural variation and population genomics

    • Year: 2017 -  Assembly of tetraploid quinoa and separation into ancestral sub-genomes

      Autoren: Bodrug, A; Minoche, AE; Bürstmayr, H; Gomez-Pando, L; Schmidt, T; Reinhardt, R; Dohm, JC; Himmelbauer, H

      Event: ALPHY 2017: Bioinformatics and Evolutionary Genomics

    • Year: 2016 -  Pflanzenforschung und Pflanzenzüchtung im Zeitalter der Genomsequenzierung

      Autoren: Dohm, JC; Himmelbauer, H

      Event: 150 Jahre Mendelsche Regeln: Vom Erbsenzählen zum Geneditieren 2016

    • Year: 2016 -  Sugar Beet BeetMap-3, and Steps to Improve the Genome Assembly and Genome Sequence Annotation (W875)

      Autoren: Weisshaar, B; Himmelbauer, H; Schmidt, T; Holtgräwe, D; Minoche, AE; Dohm, JC; Stracke, R; Zakrzewski, F; Parol-Kryger, R; Stadermann, KB; Schneider, J; Rosleff Sörensen, T; Kraft, T; Schulz, B

      Event: 24th Plant & Animal Genome Conference 2016

    • Year: 2016 -  Analyzing the genomes of wild and cultivated beets

      Autoren: Dohm, JC; Bodrug, A; McGrath, JM; Schulz, B; Himmelbauer, H

      Event: 15th European Conference on Computational Biology (ECCB)

    • Year: 2015 -  Genomics and transcriptomics of the genus Beta using short and long sequencing reads

      Autoren: Dohm, JC; Peters, P; Minoche, AE; Postel, U; Kraft, T; Schulz, B; Schmidt, T; Weisshaar, B; Himmelbauer, H

      Event: PGEV 2015: 3rd Current Opinion Conference on Plant Genome Evolution

    Supervised Theses

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