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Oostenbrink Chris

Unpublished presentations at scientific conferences

Schwaigerlehner, L; Mayrhofer, P; Pechlaner, M; Oostenbrink, C; Kunert, R (2017): Rational antibody humanization assisted by molecular dynamics simulations. [Poster]

9th Conference on Recombinant Protein Production (RPP9), Apr 23-25, 2017, Dubrovnik, CROATIA

Schwaigerlehner, L; Pechlaner, M; Mayrhofer, P; Oostenbrink, C; Kunert, R (2017): Rational antibody humanization assisted by molecular dynamics simulations. [Poster]

25th ESACT Meeting, MAY 14-17, 2017, Lausanne, SWITZERLAND

Tunega D., Gerzabek M.H., Šolc R., Petrov D., Haberhauer G., Georgieva I., Aquino A.J.A., Oostenbrink C., Lischka H. (2017): Modelling of interactions of polar and nonpolar pollutants with soil minerals and soil organic matter.

Jahrestagung der Deutschen Bodenkundlichen Gesellschaft, 2.-7.9.2017, Göttingen

Oostenbrink, Ch; (2016): Alchemical changes from molecular dynamics simulation.

Cecam Workshop - Exploring Chemical Space with Machine Learning and Quantum Mechanics , MAI 30 - JUNE 3, 2016, Zürich, Switzerland

Oostenbrink, Ch; (2016): Alchemical changes from molecular dynamics simulation.

CA' Foscari University of Venice , OCT 21, 2016, Venice, Italy

Oostenbrink, Ch; (2016): Alchemical changes from molecular dynamics simulation.

GÖCh Seminar , OCT 17, 2016, Innsbruck, Austria

Oostenbrink, Ch; (2016): Approximating robust free-energy methods using a small number of simulations .

Vertex Free-Energy Workshop, Boston, USA, MAY 15-18, 2016, Boston, USA

Oostenbrink, Ch; (2016): Calculation of free energys from molecular simulation.

International School of Biophysics, SEP 1-10, 2016, Split, Croatia

Oostenbrink, Ch; (2016): Ensembles and sampling, leading to molecular dynamics simulations.

International School of Biophysics, SEP 1-10, 2016, Split, Croatia

Oostenbrink, Ch; (2016): Free-energy calculations for ligand binding: pathways and promiscuity .

6th Visegrad Symposium on Structural Systems Biology , JUNE 19-21, 2016, Warsaw, Poland

Oostenbrink, Ch; (2015): Biomolecular simulations of Cytochrome P450 enzymes ... and some other proteins.

Mini Symposium - VU University Amsterdam , APR 2-3, 2015, Amsterdam, THE NETHERLANDS

Oostenbrink, Ch; (2015): Course on Applied Statistical Thermodynamics.

Applied Statistical Thermodynamics 2015 - Workshop in Life Sciences Foundation, NOV 16-30, 2015, Santiago de CHILE

Oostenbrink, Ch; (2015): Protein-ligand binding from distancefield distances and Hamiltonian replica exchange simulations.

Cecam Workshop, SEP 16-18, 2015, Vienna, AUSTRIA

Oostenbrink, Ch; (2015): Sampling to score in molecular simulations.

15th International Conference on BioInformatics and BioEngineering- BIBE 2015, NOV 2-3, 2015, Belgrad, SERBIA

Oostenbrink, Ch; (2015): Simulations of weird, but defined, and common, but undefined, molecules.

Kings Collage, APR 30, 2015, Kings Collage London

Oostenbrink, Ch; (2015): 1. Calculation of Binding Free Energy, 2. Prediction of Metabolism .

Workshop University of Copenhagen, MAR 2, 2015, Kopenhagen, DENMARK

Oostenbrink, Ch; (2015): Molecular models and simulations of complex systems: structure, dynamics and interactions.

TNO Research, FEB 2, 2015, Zeist, THE NETHERLANDS

Mayrhofer, P; Mader, A; Margreitter, C; Oostenbrink, C; Kunert, R (2014): Transient gene expression for evaluation of antibody humanization by molecular dynamics simulation.

Human Antibodies And Hybridomas 2014, MAR 31- APR 2, 2014, Vienna, AUSTRIA

Oostenbrink, C; (2014): Binding free energy, enthalpy and entropy – from a toy system to the real thing .

Workshop Molecular Recognition, AUG 6-14, 2014, Telluride, Colorado, USA

Oostenbrink, C; (2014): Binding free energy, enthalpy and entropy – from a toy system to the real thing .

CeCAM Workshop on Biomolecular Entropy, MAY 14-16, 2014, Vienna, AUSTRIA

Oostenbrink, C; (2014): Binding free-energy calculations involving a net charge change .

Workshop on Free Energy Methods in Drug Design, MAY 17-21, 2014, Boston, USA

Oostenbrink, C; (2014): Biomolecular simulations of Cytochromes P450.

19th North American meeting of the International Society for the Study of Xenbiotics, OCT 19-24, 2014, San Francisco, USA

Oostenbrink, C; (2014): Calculation of free energies from molecular simulation.

12th Greta Pifat-Mrzljak International School of Biophysics, SEP 28-OCT 2, 2014, Primosten, CROATIA

Oostenbrink, C; (2014): Calculation of free energy.

Copenhagen University, FEB 24-25, 2014, Copenhagen, DENMARK

Oostenbrink, C; (2014): Ensembles and sampling, leading to molecular dynamics simulations.

12th Greta Pifat-Mrzljak International School of Biophysics, SEP 28-OCT 2, 2014, Primosten, CROATIA

Oostenbrink, C; (2014): Free-energy calculations for ligand binding: pathways and promiscuity.

MGMS Meeting - Modeling Molecules and Materials, AUG 20-22, 2014, Glasgow, UK

Oostenbrink, C; (2014): Molecular models and simulations of soil organic matter: structure, dynamics and interactions with other entities .

International Symposium on: Biogeochemical interfaces in soil – towards a comprehensive and mechanistic understanding of soil functions, OCT 6-8, 2014, Leipzig, GERMANY

Oostenbrink, C; (2014): Molecular simulation techniques for complex biomolecular systems.

Annual meeting of Biophysics Austria and of the Austrian Society for Molecular Biosciences and Biotechnology (ÖGBMT), SEP 15, 2014, Vienna, AUSTRIA

Oostenbrink, C; (2014): Molecular simulation techniques for complex soil systems.

20th World Congress on Soil Sciences, JUN 6-17, 2014, Jeju, Seoul, South Korea

Oostenbrink, C; (2014): Prediction of Metabolism .

Copenhagen University, FEB 24-25, 2014, Copenhagen, DENMARK

Oostenbrink, C; (2014): Structure and Dynamics of Cytochromes P450 from Molecular Simulation.

Konferenz Deajeong University, JUN 6-17, 2014, Deajeong, Seoul, South Korea

Oostenbrink, C; (2014): Structure refinement using molecular dynamics simulations (NMR observables).

12th Greta Pifat-Mrzljak International School of Biophysics,, SEP 28-OCT 2, 2014, Primosten, CROATIA

Gerzabek, M.H., Aquino, A.J.A, Haberhauer, G., Solc, R., Pasalic, H., Lischka, H., Oostenbrink, C., Schaumann, G., Tunega, D. (2013): Humic substances (HS) models – water and cations bridges.

IUSS-Global Soil Carbon Conference, 3-6 June 2013, University Wisconsin, Madison

Oostenbrink, C; (2013): Biomolecular simulations on Cytochrome P450 enzymes .

Univ. Szeged, Ungarn, MAR 27-29, 2013, Szeged, Ungarn

Oostenbrink, C; (2013): Biomolecular simulations to rationalize and predict protein behaviour .

MolTag Seminar, University of Vienna , APR 4, 2013, Vienna, AUSTRIA

Oostenbrink, C; (2013): Calculating free energies from molecular simulations: where sampling and scoring comes together .

European Bioinformatics Institute, Cambridge, UK , JUL 9, 2013, Cambridge, UK

Oostenbrink, C; (2013): Sampling and scoring for binding free energy differences .

Workshop - New trends in Computational Chemistry for Industry Applications, Barcelona, Spanien , MAY 23-24, 2013, Barcelona, SPAIN

Oostenbrink, C; (2013): Sampling to score in molecular simulations .

“Thirty-seven years of biomolecular simulation”, Symposium ETH Zürich, CH , MAY 17, 2013 , Zürich, CH

Oostenbrink, C; (2013): Sampling to score in molecular simulations .

Univ. Basel, CH , APR 29-30, 2013, Basel, CH

Oostenbrink, C; (2013): Sampling to score in molecular simulations .

Univ. Darmstadt, D , JAN 23, 2013, Darmstadt, GERMANY

Oostenbrink, C; (2013): Structure and Dynamics of Cytochromes P450 from Molecular Simulation .

Gedeon Richter, Budapest, Ungarn , OCT 21-22, 2013, Budapest, UNGARN

Oostenbrink, C; (2013): Structure refinement by using experimental restraints in molecular dynamics simulations .

Mini Symposium Bio Nano Imaging, BOKU, Vienna , MAY 22, 2013, Vienna, AUSTRIA

Oostenbrink, C; (2013): 1. Calculation of Binding Free Energy 2. Prediction of Metabolism .

Univ. Copenhagen, DK , FEB 11, 2013, Copenhagen, DENMARK

Oostenbrink, C; (2012): Structure and thermodynamics of (bio)molecular complexes from comput-er simulation.

Mathematical Modeling (Mathmod),TU Wien, FEB 15-17, 2012, Vienna, AUSTRIA

Oostenbrink, C; (2012): 1: Calculculation of Binding Free Energy 2: Prediction of Metabolism .

University of Copenhagen, FEB 3, 2012, Copenhagen, DENMARK

Oostenbrink, C; (2012): 1: Force-field development 2: Calculation of free energy 3: Structure refinement .

10th NCCR Practical Course: Biomolecular Modeling, JAN 9-13, 2012, Kandersteg, SCHWEIZ

Oostenbrink, C; (2012): Affiniteit en binding .

Alumni-day of Chemistry at VU University, Amsterdam, MAY 10-16, 2012, Amsterdam, NIEDERLANDE

Oostenbrink, C; (2012): Biomolecular simulations to rationalize and predict protein behaviour .

Doktoratsseminar Universität Graz, NOV 30, 2012, Graz, AUSTRIA

Oostenbrink, C; (2012): In silico ADME and predictive Toxicology: Metabolism .

SafeSciMET course, Univ. Kopenhagen, DK, MAY 9-10, 2012, Copenhagen, DENMARK

Oostenbrink, C; (2012): Molecular Modeling and Simulation .

Workshop - Univ. Brno, Czech Republic, OCT 16, 2012, Brno, Czech Republic

Oostenbrink, C; (2012): Structure and dynamics of Cytochromes P450 from molecular simulation .

MDO / ISSX Meeting, Noordwijk, The Netherlands, JUNE 16-21, 2012, Noordwijk, NIEDERLANDE

Oostenbrink, C; (2012): 1: Ensembles and sampling leading to molecular dynamics simulations 2: Structure refinement using molecular dynamics simulations (NMR observables) 3: Calculation of free energy from molecular simulations .

11th Greta Pifat Mrzljak Int. School of Biophysics, SEP 30-OCT 7, 2012, Primosten, KROATIEN

Sündermann, A; (2012): Tools enhancing biomolecular simulations - Cluster Installer & GPU Computation. [Poster]

VSC Workshop - Hotel Wende, FEB 27-28, 2012, Neusiedl am See, AUSTRIA

Oostenbrink, C. (2011): Barriers in binding biomolecular free energy differences.

SimBioMa Conference, SEP 28-OCT 1, 2011, Konstanz, GERMANY

Oostenbrink, C. (2011): "Biomolecular Simulation".

Short Course and Workshop, Pancasila University, JUL 28-30, 2011, Jakarta, INDONESIA

Oostenbrink, C. (2011): Computational chemistry and advanced physiochemical characterization.

Molecular simulation techniques for complex systems: DFG-SPP 1315 Workshop, TG 5, BOKU , JAN 10, 2011, Vienna, AUSTRIA

Oostenbrink, C. (2011): Structure and flexibility of Cytochrome P40 enzymes from molecular simulation.

MipTec 2011, SEP 19-22, 2011, Basel, Switzerland

Oostenbrink, C., (2011): Calculation of Binding Free Energy.

PhD Course University of Copenhagen, FEB 9, 2011, Copenhagen, DENMARK

Oostenbrink, C., (2011): Free energy calculations from molecular simulations.

Avexxin AS, JUNE 24, 2011, Trondheim, NORWAY

Oostenbrink, C., (2011): Free energy calculations from molecular simulations..

, Max F. Perutz Laboratories, Wien, MAR 31, 2011, Vienna, AUSTRIA

Oostenbrink, C., (2011): Free energy calculations from molecular simulations - where sampling and scoring comes together.

Mini-Symposium zur Informatikgestützten Chemie, JUNE 20, 2011, Zürich, SWITZERLAND

Oostenbrink, C., (2011): Molecular modeling and simulation to explore the structure and dynamics of biomolecular complexes .

National Seminar-The New Challenges of Natural Medicine Development, Pancasila University, JULY 23, 2011, Jakarta, INDONESIA

Oostenbrink, C., (2011): Prediction of metabolism.

, PhD Course University of Copenhagen, FEB 9, 2011, Copenhagen, DENMARK

Chris, Oostenbrink (2010): Free energy calculations for multiple conformations using enhanced sampling techniques. .

, Multiscale Molecular Modeling, July 3, 2010, Edinburgh, UK

Chris, Oostenbrink (2010): Modeling and simulation to explore the structure and dynamics of biomolecular complexes. .

, Vienna Institute of Bio Technology, Apr 29, 2010, Vienna, Austria

Chris, Oostenbrink (2010): Prediction of Metabolism. .

, Copenhagen University, Mar 4, 2010, Copenhagen, Denmark

Chris, Oostenbrink (2010): Structure and (thermo)dynamics of biomolecular complexes from computer simulation. .

, Austrian Institute of Technology, Opening Symposium, Sep 13, 2010, Vienna, Austria

Chris, Oostenbrink (2010): The role of water molecules in docking studies of Cytochrome P450 2D6 .

, 240th ACS Meeting, Aug 23, 2010, Boston, USA

Chris Oostenbrink, Dr. (2010): "Free energy calculations from molecular simulation - where sampling and scoring comes together".

, Conference Molecular Modeling 2010, Australasian molecular modeling association Melbourne, Australia, Nov 29, 2010, Melbourne, Australia

Chris Oostenbrink, Dr. (2010): Structure and (thermo)dynamics of biomolecular complexes from computer simulation.

, Seminar-University of Queensland, Nov 15, 2010, Brisbane, Australia

Chris Oostenbrink (2009): Binding thermodynamics from molecular simulation.

, Seminar series "Computational Life Sciences", December 11, 2009, University of Vienna, Austria

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