Juliane Dohm
Assoc. Prof. Priv.Doz.Dr. Juliane Dohm
Institute of Computational Biology
Location Muthgasse 18, 1190 Wien
Email dohm@boku.ac.at
Tel: +43 1 47654-79156
Career
- 2020 Habilitation in Bioinformatics (Venia Docendi), University of Natural Resources and Life Sciences Vienna
- 2008 PhD in Bioinformatics (Dr. rer. nat.), University Potsdam and Max Planck Institute for Molecular Genetics Berlin
- 2002 Diploma Biochemistry (Dipl.-Biochem.), Ruhr University Bochum and Max Planck Institute of Molecular Physiology Dortmund
Projects
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Publications
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Knowledge Transfer to Society
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Media
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Presentations
Year: 2024 - Insights into RNAse-based self- incompatibility system in Beta vulgaris (Talk)
Autoren: Yardeni, G; Holzweber, T; Dohm, JC; Himmelbauer, H
Event: 20th International Botanical Congress 2024
Period: 21.07.2024 - 27.07.2024 | Location: IFEMA MADRID | Location: Madrid, Spain | Organizer:
Spanish Botanical Society | Organizer: La Sociedad Botánica EspañolaYear: 2024 - Machine learning approaches for the analysis of genomic variants in plants (Poster)
Autoren: Sandell, F; Nguyen-Hoang, A; Himmelbauer, H; Dohm, J
Event: German Conference on Bioinformatics 2024
Period: 30.09.2024 - 02.10.2024 | Location: Bielefeld, Deutschland | Organizer:
DECHEMA Society for Chemical Engineering and BiotechnologyYear: 2024 - Genomic analysis of wild and cultivated beets (Talk)
Autoren: Sandell, F; Himmelbauer, H; Dohm, J
Event: 79th IIRB Congress 2024 'Innovation: our driver for a profitable and ecologically balanced sugar beet production'
Period: 27.02.2024 - 28.02.2024 | Location: Brüssel, Brüssel, Belgien | Organizer:
International Institute of Sugar Beet ResearchYear: 2024 - Methylation analysis based on a plant-specific deep learning model (Poster)
Autoren: Holzweber, T; Dorn, K; Himmelbauer, H; Dohm, JC
Event: German Conference on Bioinformatics 2024
Period: 30.09.2024 - 02.10.2024 | Location: Bielefeld, Deutschland | Organizer:
DECHEMA Society for Chemical Engineering and BiotechnologyYear: 2024 - Towards characterization of the genetic self-incompatibility system in Beta vulgaris (Lecture)
Autoren: Yardeni, G
Event: EvolVienna meeting January 2024
Period: 31.01.2024 - 31.01.2024 | Location: Wien, Wien, Österreich | Organizer:
GMI - Gregor Mendel Institute of Molecular Plant BiologyYear: 2024 - Exploiting k-mers for genotype-phenotype association in spinach (Poster)
Autoren: Schönmann, L
Event: German Conference on Bioinformatics 2024
Period: 30.09.2024 - 02.10.2024 | Location: Bielefeld, Deutschland | Organizer:
DECHEMA Society for Chemical Engineering and BiotechnologyYear: 2023 - Back to the roots: Phylogeny of wild and cultivated beets (Talk)
Autoren: Wascher, FL; Himmelbauer, H; Dohm, JC
Event: 31st Conference on Intelligent Systems for Molecular Biology / 22nd European Conference on Computational Biology
Period: 23.07.2023 - 27.07.2023 | Location: Lyon, FRANCE
Year: 2022 - Long-read assemblies of sugar beet and sea beet (Poster)
Autoren: Holzweber T; Dohm, JC; Gruber KR; Himmelbauer H
Event: 2nd Beet Resources Conference 2022
Period: 06.10.2022 - 07.10.2022 | Location: Vienna, Austria | Organizer:
BOKU ViennaYear: 2022 - Genetic diversity in Amaranthaceae crops (Poster)
Autoren: Wascher, FL; Himmelbauer, H; Dohm, JC
Event: 21st European Conference on Computational Biology ECCB 2022
Period: 18.09.2022 - 21.09.2022 | Location: Sitges, Spain
Year: 2022 - What we can learn from Beta re-sequencing data (Talk)
Autoren: Wascher, FL; Himmelbauer, H; Dohm, JC
Event: 2nd Beet Resources Conference 2022
Period: 06.10.2022 - 07.10.2022 | Location: Vienna, Austria | Organizer:
BOKU ViennaYear: 2022 - K-mer based phylogeny of wild and cultivated beets (Poster)
Autoren: Wascher, FL; Nancy Stralis-Pavese, N; Himmelbauer, H; Dohm, JC
Event: 200 years Gregor Mendel: of peas, cows and people 2022
Period: 11.03.2022 | Location: Vienna, AUSTRIA | Location: Vienna, Austria
Year: 2022 - Haplotype divergence of flowering time regulator genes in sugar beet and wild beets (Talk)
Autoren: Schönmann, L; Himmelbauer, H; Dohm, JC
Event: 2nd Beet Resources Conference 2022
Period: 06.10.2022 - 07.10.2022 | Location: Vienna, Austria | Organizer:
BOKU ViennaYear: 2022 - Evolutionary dynamics of the repeat landscape in sugar beet and its wild relatives (Poster)
Autoren: Blazek, L; Dohm, JC; Himmelbauer, H
Event: 200 years Gregor Mendel: of peas, cows and people 2022
Period: 11.03.2022 | Location: Vienna, AUSTRIA | Location: Vienna, Austria
Year: 2021 - K-mer-based phylogeny of wild and cultivated beets (Poster)
Autoren: Wascher, F; Stralis-Pavese, N; Schulz, B; Himmelbauer, H; Dohm, JC
Event: German Conference on Bioinformatics 2021
Period: 06.09.2021 - 09.09.2021 | Location: Online
Year: 2021 - Comparison of wild and cultivated beets regarding repeats and transposon insertion polymorphisms (Poster)
Autoren: Blazek, L; Dohm, JC; Himmelbauer, H
Event: German Conference on Bioinformatics 2021
Period: 06.09.2021 - 09.09.2021 | Location: Online
Year: 2021 - Analysis of sugar beet and wild beet genomes to study relationships, origins, population dynamics and selection (Poster)
Autoren: Felkel, S; Stralis-Pavese, N; Schulz, B; Dohm, JC; Himmelbauer, H
Event: German Conference on Bioinformatics 2021
Period: 06.09.2021 - 09.09.2021 | Location: Online
Year: 2021 - Xylose metabolism in Komagataella phaffii (Pichia pastoris) (Poster)
Autoren: Gomez Paes, B; Heistinger, L; Koizar, D; Mairinger, T; Ata-Akyol, Ö; Dohm, J; Troyer, C; Mattanovich, D
Event: ICY15 meets ICYGMB30
Period: 23.08.2021 - 27.08.2021 | Location: Online
Year: 2020 - Analysis of subgenome structure and evolution in allopolyploid plants (Talk)
Autoren: Schiavinato, M; Bodrug, A; Marcet-Houben, M; Gabaldón, T; Dohm, JC; Himmelbauer, H
Event: "Digital Breeding". Internationales Symposium der Gesellschaft für Pflanzenzüchtung e.V. (GPZ) 2020
Period: 11.02.2020 - 13.02.2020 | Location: Tulln an der Donau, Austria | Organizer:
Society for Plant BreedingYear: 2020 - Evolutionary dynamics of the repeat landscape in sugar beet and its wild relatives (Poster)
Autoren: Blazek, B; Dohm, JC; Himmelbauer, H
Event: "Digital Breeding". Internationales Symposium der Gesellschaft für Pflanzenzüchtung e.V. (GPZ) 2020
Period: 11.02.2020 - 13.02.2020 | Location: Tulln an der Donau, Austria | Organizer:
Society for Plant BreedingYear: 2020 - Quinoa sequencing and detection of haplotype blocks for genome scaffolding (Poster)
Autoren: Himmelbauer, H; Bodrug, A; Wascher, FL; Stralis-Pavese, N; Bürstmayr, H; Dohm, JC
Event: "Digital Breeding". Internationales Symposium der Gesellschaft für Pflanzenzüchtung e.V. (GPZ) 2020
Period: 11.02.2020 - 13.02.2020 | Location: Tulln an der Donau, Austria | Organizer:
Society for Plant BreedingYear: 2020 - Population analysis of sugar beet and wild beets (Poster)
Autoren: Wascher, FL; Felkel, S; Stralis-Pavese, N; Schulz, B; Dohm, JC; Himmelbauer, H
Event: "Digital Breeding". Internationales Symposium der Gesellschaft für Pflanzenzüchtung e.V. (GPZ) 2020
Period: 11.02.2020 - 13.02.2020 | Location: Tulln an der Donau, Austria | Organizer:
Society for Plant BreedingYear: 2019 - Plant Speed Dating (Talk)
Autoren: Schiavinato, M; Marcet-Houben, M; Dohm, JC; Gabaldón, T; Himmelbauer, H
Event: 12th European Conference on Python in Science
Period: 02.09.2019 - 06.09.2019 | Location: Bilbao, Spain
Year: 2018 - A strategy for subgenome separation in Nicotiana benthamiana (Poster)
Autoren: Schiavinato, M; Dohm, JC; Gabaldón, T; Himmelbauer, H
Event: XIV Symposium on Bioinformatics (JBI 2018)
Period: 14.11.2018 - 16.11.2018 | Location: Granada, Spain
Year: 2018 - Benchmarking the impact of long-read correction methods (Poster)
Autoren: Peters, P; Stralis Pavese, N; Himmelbauer, H; Dohm, JC
Event: German Conference on Bioinformatics 2018
Period: 25.09.2018 - 28.09.2018 | Location: Vienna, Austria
Year: 2018 - Detection of haplotype blocks for genome scaffolding in plants (Poster)
Autoren: Bodrug, A; Bürstmayr, H; Stralis Pavese, N; Dohm, JC; Himmelbauer, H
Event: German Conference on Bioinformatics 2018
Period: 25.09.2018 - 28.09.2018 | Location: Vienna, Austria
Year: 2018 - Comparative genomics of the pathogenic bacterium Tannerella forsythia (Poster)
Autoren: Zwickl, NF; Stralis Pavese, N; Schäffer, C; Himmelbauer, H; Dohm, JC
Event: German Conference on Bioinformatics 2018
Period: 25.09.2018 - 28.09.2018 | Location: Vienna, Austria
Year: 2018 - Population structure and allele frequency clines in wild and cultivated beets (Beta vulgaris) (Poster)
Autoren: McCann, J; Wascher, F; Stralis Pavese, N; Schulz, B; Dohm, JC; Himmelbauer, H
Event: German Conference on Bioinformatics 2018
Period: 25.09.2018 - 28.09.2018 | Location: Vienna, Austria
Year: 2017 - Gene prediction and gene set analysis of Nicotiana benthamiana (Poster)
Autoren: Schiavinato, M; Strasser, R; Dohm, JC; Himmelbauer, H
Event: Austrian Proteomics and Metabolomics Research Symposium APRS 2017
Period: 06.09.2017 - 08.09.2017 | Location: Graz, Austria
Year: 2017 - Assembly of tetraploid quinoa and separation into ancestral sub-genomes (Poster)
Autoren: Bodrug, A; Minoche, AE; Bürstmayr, H; Gomez-Pando, L; Schmidt, T; Reinhardt, R; Dohm, JC; Himmelbauer, H
Event: ALPHY 2017: Bioinformatics and Evolutionary Genomics
Period: 01.02.2017 - 03.02.2017 | Location: Lyon, France
Year: 2017 - Genome analysis of wild and cultivated beets (Poster)
Autoren: Dohm, JC; Bodrug, A; Rodríguez del Río, A; McGrath, MJ; Schulz, B; Himmelbauer, H
Event: NGS' 17: Structural variation and population genomics
Period: 03.04.2017 - 05.04.2017 | Location: Barcelona, Spain
Year: 2016 - Pflanzenforschung und Pflanzenzüchtung im Zeitalter der Genomsequenzierung (Talk)
Autoren: Dohm, JC; Himmelbauer, H
Event: 150 Jahre Mendelsche Regeln: Vom Erbsenzählen zum Geneditieren 2016
Period: 17.03.2016 - 18.03.2016 | Location: Vienna, Austria
Year: 2016 - Analyzing the genomes of wild and cultivated beets (Poster)
Autoren: Dohm, JC; Bodrug, A; McGrath, JM; Schulz, B; Himmelbauer, H
Event: 15th European Conference on Computational Biology (ECCB)
Period: 03.09.2016 - 07.09.2016 | Location: The Hague, Netherlands
Year: 2016 - Sugar Beet BeetMap-3, and Steps to Improve the Genome Assembly and Genome Sequence Annotation (W875) (Talk)
Autoren: Weisshaar, B; Himmelbauer, H; Schmidt, T; Holtgräwe, D; Minoche, AE; Dohm, JC; Stracke, R; Zakrzewski, F; Parol-Kryger, R; Stadermann, KB; Schneider, J; Rosleff Sörensen, T; Kraft, T; Schulz, B
Event: 24th Plant & Animal Genome Conference 2016
Period: 09.01.2016 - 13.01.2016 | Location: San Diego, CA, USA
Year: 2015 - Genomics and transcriptomics of the genus Beta using short and long sequencing reads (Poster)
Autoren: Dohm, JC; Peters, P; Minoche, AE; Postel, U; Kraft, T; Schulz, B; Schmidt, T; Weisshaar, B; Himmelbauer, H
Event: PGEV 2015: 3rd Current Opinion Conference on Plant Genome Evolution
Period: 06.09.2015 - 08.09.2015 | Location: Amsterdam, Netherlands
Supervised Theses
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