BOKU - Universität für Bodenkultur Wien - Forschungsinformationssystem
Gewählte Publikation:
Neumann, NK; Stoppacher, N; Zeilinger, S; Degenkolb, T; Brückner, H; Schuhmacher, R; .
(2015):
The peptaibiotics database - a comprehensive online resource.
Chem Biodivers. 2015; 12(5):743-751
FullText
FullText_BOKU
- Abstract:
- In this work, we present the Peptaibiotics Databasexxx (PDB), a comprehensive online resource, which intends to cover all Aib-containing non-ribosomal fungal peptides currently described in scientific literature. This database shall extend and update the recently published Comprehensive Peptaibiotics Databasexxx and currently consists of 1,297 peptaibiotic sequences. In a literature survey, a total of 235 peptaibiotic sequences published between January 2013 and June 2014 have been compiled, and added to the list of 1,062 peptides in the recently published Comprehensive Peptaibiotics Databasexxx. The presented database is intended as a public resource freely accessible to the scientific community at peptaibiotics-database.boku.ac.at. The search options of the previously published repository and the presentation of sequence motif searches have been extended significantly. All of the available search options can be combined to create complex database queries. As a public repository, the presented database enables the easy upload of new peptaibiotic sequences or the correction of existing informations. In addition, an administrative interface for maintenance of the content of the database has been implemented, and the design of the database can be easily extended to store additional information to accommodate future needs of the peptaibiomics communityxxx.
- Autor*innen der BOKU Wien:
- Neumann Nora Katharina Nicole
- Schuhmacher Rainer
- Stoppacher Norbert
- Find related publications in this database (Keywords)
- Online databases
- Non-ribosomal peptides
- Peptaibols
- Peptide antibiotics
- Peptides
Altmetric: